NMR in Biomedicine · 2019 · 29 citations · 33 references
The pH value is a potential physiological marker for clinical diagnosis as it is altered in pathologies such as tumors. While intracellular pH can be measured noninvasively via phosphorus spectroscopy (<sup>31</sup> P MRSI), Amide Proton Transfer-Chemical Exchange Saturation Transfer (APT-CEST) MRI has been suggested as an alternative method for pH quantification. To assess the suitability of APT-CEST contrast for pH quantification, two approaches (magnetization transfer ratio asymmetry [MTR<sub>asym</sub> ] and Lorentzian difference analysis [LDA]) for analyzing the Z-spectrum have been correlated with pH values obtained by <sup>31</sup> P MRSI. Fourteen patients with glioblastoma and 12 healthy controls were included. In contrast to MTR<sub>asym</sub> , the LDA is modeling the direct water saturation and the semi-solid magnetization transfer, allowing a separate evaluation of the aliphatic nuclear Overhauser effect and the APT-CEST. The results of our study show that the pH values obtained by <sup>31</sup> P MRSI correspond well with both methods describing the APT-CEST contrast. Two-sample t-test showed significant differences in MTR<sub>asym</sub> , LDA and pH obtained by <sup>31</sup> P MRSI for regions of interest in glioblastoma, contralateral control areas and normal appearing white matter (P < 0.001). A slightly improved correlation between the amide signal and pH was found after performing LDA (r = 0.78) compared with MTR<sub>asym</sub> (r = 0.70). While both methods can be used to monitor pH changes, the LDA approach appears to be better suited.
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ImageJ2: ImageJ for the next generation of scientific image data
Curtis Rueden, Johannes Schindelin, Mark Hiner et al. · BMC Bioinformatics · 2017 · 6K citations · Full text