Concepedia

Insight on collagen self-assembly mechanisms by coupling molecular dynamics and UV spectroscopy techniques

Ludovica Leo, Maria Grazia Bridelli, Eugenia Polverini

Biophysical Chemistry · 2019 · 28 citations · 28 references

DOI

Concepts

References

28

VMD: Visual molecular dynamics

William Humphrey, Andrew Dalke, Klaus Schulten · Journal of Molecular Graphics · 1996 · 66.6K citations

, , +12

GROMACS: Fast, flexible, and free

David van der Spoel, Erik Lindahl, Berk Hess et al. · Journal of Computational Chemistry · 2005 · 19.1K citations

, , +17

SWISS‐MODEL and the Swiss‐Pdb Viewer: An environment for comparative protein modeling

Nicolas Guex, Manuel C. Peitsch · Electrophoresis · 1997 · 11.3K citations

, , +7

Definition and testing of the GROMOS force-field versions 54A7 and 54B7

Nathan Schmid, Andreas P. Eichenberger, Alexandra Choutko et al. · European Biophysics Journal · 2011 · 2.5K citations · Full text

, , +4

Microfibrillar structure of type I collagen <i>in situ</i>

Joseph Orgel, Thomas C. Irving, Andrew Miller et al. · Proceedings of the National Academy of Sciences · 2006 · 939 citations · Full text

, , +16