Concepedia

Umbrella Visualization: A method of analysis dedicated to glycan flexibility with UnityMol

Camille Besançon, Alexandre Guillot, Sébastien Blaise, Manuel Dauchez, Nicolas Belloy, Jessica Jonquet, Stéphanie Baud

Methods · 2019 · 11 citations · 35 references

DOIFull text

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Concepts

References

35

VMD: Visual molecular dynamics

William Humphrey, Andrew Dalke, Klaus Schulten · Journal of Molecular Graphics · 1996 · 66.6K citations

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The Protein Data Bank

Helen M. Berman · Nucleic Acids Research · 2000 · 39.8K citations

, , +10

The PyMOL Molecular Graphics System

Warren L. DeLano · Medical Entomology and Zoology · 2002 · 18.1K citations

, , +11

GROMACS: A message-passing parallel molecular dynamics implementation

Herman J. C. Berendsen, David van der Spoel, Rudi van Drunen · Computer Physics Communications · 1995 · 10.5K citations

, , +10

GROMACS 4.5: a high-throughput and highly parallel open source molecular simulation toolkit

Sander Pronk, Szilárd Páll, Roland Schulz et al. · Bioinformatics · 2013 · 7.6K citations · Full text

, , +17