mSystems · 2017 · 62 citations · 64 references
Life SciencesMicrobiologyPhysiologyMetagenomicsMicrobial EcologyMicrobiome ResearchGut MicrobiomeGut MicrobiotaMicrobial Community DynamicsMicrobiome CompositionMicrobiome DynamicsShotgun Metagenomic SequencingMicrobial Community CompositionMicrobial Population DynamicsMicrobial Population StructureMicrobiome Temporal VariationMicrobiome VariabilityMicrobiota StabilityShotgun Metagenomic AnalysisTemporal Microbial Dynamics
The human microbiota correlates closely with the health status of its host. This article analyzes the microbial composition of several subjects under different conditions over time spans that ranged from days to months. Using the Langevin equation as the basis of our mathematical framework to evaluate microbial temporal stability, we proved that stable microbiotas can be distinguished from unstable microbiotas. This initial step will help us to determine how temporal microbiota stability is related to a subject's health status and to develop a more comprehensive framework that will provide greater insight into this complex system.
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Diet rapidly and reproducibly alters the human gut microbiome
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A core gut microbiome in obese and lean twins
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A metagenome-wide association study of gut microbiota in type 2 diabetes
Junjie Qin, Yingrui Li, Zhiming Cai et al. · Nature · 2012 · 7K citations · Full text