Concepedia

aRNApipe: a balanced, efficient and distributed pipeline for processing RNA-seq data in high-performance computing environments

Arnald Alonso, Brittany N. Lasseigne, Kelly L. Williams, Josh Nielsen, Ryne C. Ramaker, Andrew A. Hardigan, Bobbi E. Johnston, Brian S. Roberts, Sara J. Cooper, Sara Marsal,

Bioinformatics · 2017 · 28 citations · 2 references

DOIFull text

Open access

Abstract

Supplementary data are available at Bioinformatics online.

References

2

VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing

Daniel C. Koboldt, Qunyuan Zhang, David E. Larson et al. · Genome Research · 2012 · 5.2K citations · Full text

, , +13

Transcriptome sequencing to detect gene fusions in cancer

Christopher A. Maher, Chandan Kumar‐Sinha, Xuhong Cao et al. · Nature · 2009 · 906 citations · Full text

, , +6