Neurochemistry International · 2019 · 149 citations · 48 references
Life SciencesImmunologyNutritional SciencesInflammationMucosal ImmunologyNutritional ImmunologyDiet-disease AssociationsGut HealthGut MicrobiomeGut MicrobiotaMetabolic SyndromeMicrobiome DysbiosisDisease-associated DysbiosisFatty AcidsGut Microbiome DysbiosisGut Microbiota DysbiosisGut Microbiota EffectsMucosal DysbiosisMucosal Immune DysregulationShort-chain Fatty Acid Depletion
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Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text
Search and clustering orders of magnitude faster than BLAST
R. C. Edgar · Bioinformatics · 2010 · 21.7K citations · Full text
Metagenomic biomarker discovery and explanation
Nicola Segata, Jacques Izard, Levi Waldron et al. · Genome biology · 2011 · 16.7K citations · Full text
FLASH: fast length adjustment of short reads to improve genome assemblies
Tanja Magoč, Steven L. Salzberg · Bioinformatics · 2011 · 15.7K citations · Full text
UCHIME improves sensitivity and speed of chimera detection
R. C. Edgar, Brian J. Haas, José C. Clemente et al. · Bioinformatics · 2011 · 15.5K citations · Full text
Life Sciences, Biology, Microbiology +17