Neuropsychiatric Disease and Treatment · 2019 · 57 citations · 43 references
Life SciencesNeurobiologyNeuroscienceMetabolomicsNeurobiology Of DiseaseNeurochemistryAmino Acid MetabolomicsAmino Acid NeurochemistryMass Spectrometry-based MetabolomicsMetabolite ProfilingMetabolomics Data AnalysisUntargeted MetabolomicsAmino Acid Metabolic PhenotypingAmino AcidsDepression PathophysiologyDisease Metabolite ProfilingFatty AcidsMetabolomic PhenotypingNeurobiology Of DepressionUntargeted Metabolomics Analysis
Purpose: Depression is a complex psychiatric disorder. Various depressive rodent models are usually constructed based on different pathogenesis hypotheses. Materials and methods: Herein, using our previously established naturally occurring depressive (NOD) model in a non-human primate (cynomolgus monkey, Macaca fascularis), we performed metabolomics analysis of cerebrospinal fluid (CSF) from NOD female macaques (N=10) and age- and gender-matched healthy controls (HCs) (N=12). Multivariate statistical analysis was used to identify the differentially expressed metabolites between the two groups. Ingenuity Pathways Analysis and MetaboAnalyst were applied for predicted pathways and biological functions analysis. Results: Totally, 37 metabolites responsible for discriminating the two groups were identified. The NOD macaques were mainly characterized by perturbations of fatty acid biosynthesis, ABC transport system, and amino acid metabolism (eg, aspartate, glycine, serine, and threonine metabolism). Interestingly, we found that eight altered CSF metabolites belonging to short-chain fatty acids and amino acids were also observed in the serum of NOD macaques (N=13 per group). Conclusion: Our findings suggest that peripheral and central short-chain fatty acids and amino acids are implicated in the onset of depression. Keywords: naturally occurring depressive, depression, non-human primate, metabonomics, cerebrospinal fluid, short-chain fatty acid
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Causal analysis approaches in Ingenuity Pathway Analysis
A. Krämer, Jeff Green, Jack Pollard et al. · Bioinformatics · 2013 · 6.1K citations · Full text
Lipid Alterations in Lipid Rafts from Alzheimer's Disease Human Brain Cortex
Noemí Fabelo, Gabriel Santpere, Berta Puig et al. · Journal of Alzheimer s Disease · 2010 · 276 citations · Full text