Single-molecule nascent RNA sequencing identifies regulatory domain architecture at promoters and enhancers

Model-based Analysis of ChIP-Seq (MACS)

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An integrated encyclopedia of DNA elements in the human genome

Nature · 2012 · 19.4K citations · Full text

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Mfold web server for nucleic acid folding and hybridization prediction

Michael Zuker · Nucleic Acids Research · 2003 · 13.6K citations · Full text

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Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome

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An atlas of active enhancers across human cell types and tissues

Robin Andersson, Claudia Gebhard, Irene Miguel-Escalada et al. · Nature · 2014 · 2.8K citations · Full text

Life Sciences, Bioinformatics, Genetics +9