Scientific Reports · 2018 · 89 citations · 58 references
Veterinary MedicineInfectious DiseasesMicrobiologyHost-pathogen InteractionsMolecular VirologyVirologyAnimal Infectious DiseasesAnimal VirusesPathogenesis Of Infectious DiseaseViral InfectionsViral PathogenesisViral PathologyAnimal Fungal PathogensBats As Reservoir HostsDisease Severity CorrelationsMitogen-activated Protein Kinase CascadesPersistenceViral Pathogenesis In WildlifeViral Shedding AssessmentWhite-nose Syndrome
Spillover of viruses from bats to other animals may be associated with increased contact between them, as well as increased shedding of viruses by bats. Here, we tested the prediction that little brown bats (Myotis lucifugus) co-infected with the M. lucifugus coronavirus (Myl-CoV) and with Pseudogymnoascus destructans (Pd), the fungus that causes bat white-nose syndrome (WNS), exhibit different disease severity, viral shedding and molecular responses than bats infected with only Myl-CoV or only P. destructans. We took advantage of the natural persistence of Myl-CoV in bats that were experimentally inoculated with P. destructans in a previous study. Here, we show that the intestines of virus-infected bats that were also infected with fungus contained on average 60-fold more viral RNA than bats with virus alone. Increased viral RNA in the intestines correlated with the severity of fungus-related pathology. Additionally, the intestines of bats infected with fungus exhibited different expression of mitogen-activated protein kinase pathway and cytokine related transcripts, irrespective of viral presence. Levels of coronavirus antibodies were also higher in fungal-infected bats. Our results suggest that the systemic effects of WNS may down-regulate anti-viral responses in bats persistently infected with M. lucifugus coronavirus and increase the potential of virus shedding.
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Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text
Daehwan Kim, Geo Pertea, Cole Trapnell et al. · Genome biology · 2013 · 13.7K citations · Full text
REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms
Fran Supek, Matko Bošnjak, Nives Škunca et al. · PLoS ONE · 2011 · 7K citations · Full text