Concepedia

Branched pentapeptides as potent inhibitors of the vascular endothelial growth factor 165 binding to Neuropilin-1: Design, synthesis and biological activity

Dagmara Tymecka, Anna K. Puszko, Piotr F. J. Lipiński, Bartłomiej Fedorczyk, Beata Wileńska, Karolina Sura, G. Perret, Aleksandra Misicka

European Journal of Medicinal Chemistry · 2018 · 27 citations · 39 references

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39

UCSF Chimera—A visualization system for exploratory research and analysis

Eric F. Pettersen, Thomas D. Goddard, Conrad C. Huang et al. · Journal of Computational Chemistry · 2004 · 47.8K citations

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GROMACS: High performance molecular simulations through multi-level parallelism from laptops to supercomputers

M Abraham, Teemu J. Murtola, Roland Schulz et al. · SoftwareX · 2015 · 26.8K citations · Full text

, , +11

MDAnalysis: A toolkit for the analysis of molecular dynamics simulations

Naveen Michaud‐Agrawal, Elizabeth J. Denning, Thomas B. Woolf et al. · Journal of Computational Chemistry · 2011 · 4.6K citations · Full text

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CHARMM36 all-atom additive protein force field: Validation based on comparison to NMR data

Jing Huang, Alexander D. MacKerell · Journal of Computational Chemistry · 2013 · 4.5K citations · Full text

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CHARMM-GUI Input Generator for NAMD, GROMACS, AMBER, OpenMM, and CHARMM/OpenMM Simulations Using the CHARMM36 Additive Force Field

Jumin Lee, Xi Cheng, Jason Swails et al. · Journal of Chemical Theory and Computation · 2015 · 4.3K citations · Full text

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