Concepedia

Whole genome resequencing of tobacco (Nicotiana tabacum L.) genotypes and high-throughput SNP discovery

Ganesh Chowthi Thimmegowda, Suresh Kumar Ramadoss, Vinay Kaikala, Rajkumar Rathinavelu, Venkata Reddy Thamalampudi, V. N. Chakravarthi Dhavala, G. V. S. Saiprasad

Molecular Breeding · 2018 · 15 citations · 15 references

DOI

Concepts

References

15

Trimmomatic: a flexible trimmer for Illumina sequence data

Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text

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Fast gapped-read alignment with Bowtie 2

Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations

, , +11

Circos: An information aesthetic for comparative genomics

Martin Krzywinski, Jacqueline E. Schein, İnanç Birol et al. · Genome Research · 2009 · 11.9K citations · Full text

, , +17

Haplotype-based variant detection from short-read sequencing

Erik Garrison, Gábor Marth · arXiv (Cornell University) · 2012 · 4.1K citations · Full text

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Sambamba: fast processing of NGS alignment formats

Artem Tarasov, Albert J. Vilella, Edwin Cuppen et al. · Bioinformatics · 2015 · 2.7K citations · Full text

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