Science · 2018 · 362 citations · 73 references
Life SciencesEvolutionary BiologyGeneticsComparative GenomicsGenome EvolutionGenomicsDrug Metabolism GeneticsDrug Metabolism GenomicsGenome SequencingAlkaloid Biosynthetic Gene ClustersEnzymesGene Cluster AnnotationGene Clusters For Alkaloid BiosynthesisMetabolic Pathway CurationMetabolic Pathway ReconstructionNeolithic TransitionSubstance Use Genetics
Poppy genome reveals evolution of opiates The opium poppy has been a source of painkillers since Neolithic times. Attendant risks of addiction threaten many today. Guo et al. now deliver a draft of the opium poppy genome, which encompasses 2.72 gigabases assembled into 11 chromosomes and predicts more than 50,000 protein-coding genes. A particularly complex gene cluster contains many critical enzymes in the metabolic pathway that generates the alkaloid drugs noscapine and morphinan. Science , this issue p. 343
73
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text
Fast and accurate short read alignment with Burrows–Wheeler transform
Heng Li, Richard Durbin · Bioinformatics · 2009 · 62.8K citations · Full text
MUSCLE: multiple sequence alignment with high accuracy and high throughput
R. C. Edgar · Nucleic Acids Research · 2004 · 46.5K citations · Full text