Nature Communications · 2018 · 45 citations · 59 references
MedicineCardiologyMolecular BiologyGene ExpressionInflammationTranscriptional RegulationCardiac PhysiologyCardiovascular DiseaseCardiovascular Molecular PhysiologyHeart FailureInherited CardiomyopathiesMuscular DystrophyChromatin PatternHeart Failure Molecular MechanismsMuscle GrowthNf-κb SignalingNuclear Factor Kappa B SignalingRepressive Chromatin MarksSkeletal Muscle DegenerationTranscriptional Repressors
Duchenne muscular dystrophy (DMD) is a neuromuscular disorder causing progressive muscle degeneration. Although cardiomyopathy is a leading mortality cause in DMD patients, the mechanisms underlying heart failure are not well understood. Previously, we showed that NF-κB exacerbates DMD skeletal muscle pathology by promoting inflammation and impairing new muscle growth. Here, we show that NF-κB is activated in murine dystrophic (mdx) hearts, and that cardiomyocyte ablation of NF-κB rescues cardiac function. This physiological improvement is associated with a signature of upregulated calcium genes, coinciding with global enrichment of permissive H3K27 acetylation chromatin marks and depletion of the transcriptional repressors CCCTC-binding factor, SIN3 transcription regulator family member A, and histone deacetylase 1. In this respect, in DMD hearts, NF-κB acts differently from its established role as a transcriptional activator, instead promoting global changes in the chromatin landscape to regulate calcium genes and cardiac function.
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Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks
Paul Shannon, Andrew Markiel, Owen Ozier et al. · Genome Research · 2003 · 54.3K citations · Full text
An integrated encyclopedia of DNA elements in the human genome