Concepedia

Improving the standards for gut microbiome analysis of fecal samples: insights from the field biology of Japanese macaques on Yakushima Island

Takashi Hayakawa, Akiko Sawada, Akifumi S. Tanabe, Shinji Fukuda, Takushi Kishida, Yosuke Kurihara, Kei Matsushima, Jie Liu, Etienne-Francois Akomo-Okoue, Waleska Gravena,

Primates · 2018 · 23 citations · 66 references

DOI

Concepts

References

66

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

Alexandros Stamatakis · Bioinformatics · 2014 · 34.3K citations · Full text

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Naive Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy

Qiong Wang, George M Garrity, James M. Tiedje et al. · Applied and Environmental Microbiology · 2007 · 20.5K citations · Full text

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A human gut microbial gene catalogue established by metagenomic sequencing

Junjie Qin, Ruiqiang Li, Jeroen Raes et al. · Nature · 2010 · 11.7K citations · Full text

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Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

Anna Klindworth, Elmar Pruesse, Timmy Schweer et al. · Nucleic Acids Research · 2012 · 9K citations · Full text

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UniFrac: a New Phylogenetic Method for Comparing Microbial Communities

Catherine Lozupone, Rob Knight · Applied and Environmental Microbiology · 2005 · 8.6K citations · Full text

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