Cell Reports · 2018 · 47 citations · 31 references
Life SciencesCell BiologyMolecular BiologyEpigeneticsEpigenomicsStem Cell BiologyDevelopmental EpigeneticsDevelopmental EpigenomicsEpigenetic Control Of DifferentiationEpigenetic ReprogrammingNeural Stem CellsOne-carbon MetabolismEpigenomic AnalysisEpigenomic LandscapeEpigenomic RegulationNeural Cell DifferentiationNeural Stem Cell DifferentiationNeural Stem Cell MetabolismNeural Stem Cell Self-renewalStem Cell Epigenomics
Metabolic pathways, once seen as a mere consequence of cell states, have emerged as active players in dictating different cellular events such as proliferation, self-renewal, and differentiation. Several studies have reported a role for folate-dependent one-carbon (1C) metabolism in stem cells; however, its exact mode of action and how it interacts with other cues are largely unknown. Here, we report a link between the Eph:ephrin cell-cell communication pathway and 1C metabolism in controlling neural stem cell differentiation. Transcriptional and functional analyses following ephrin stimulation revealed alterations in folate metabolism-related genes and enzymatic activity. In vitro and in vivo data indicate that Eph-B forward signaling alters the methylation state of H3K4 by regulating 1C metabolism and locks neural stem cell in a differentiation-ready state. Our study highlights a functional link between cell-cell communication, metabolism, and epigenomic remodeling in the control of stem cell self-renewal.
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<i>lumi</i>: a pipeline for processing Illumina microarray
Pan Du, Warren A. Kibbe, Simon Lin · Bioinformatics · 2008 · 2.1K citations · Full text
Metabolic Plasticity in Stem Cell Homeostasis and Differentiation
Clifford D.L. Folmes, Petras P. Dzeja, Timothy J. Nelson et al. · Cell stem cell · 2012 · 680 citations · Full text