Nature Communications · 2018 · 225 citations · 48 references
Life SciencesCell BiologyImmunologyAdaptive ImmunityImmunology Of Infectious DiseasesInnate ImmunityAdaptive Immune ResponsesAntigen RecognitionCell-mediated ImmunityImmune Repertoire FormationT Cell BiologyT Cell DifferentiationAdaptive Immune Cell FunctionAdaptive Immune Responses To Viral InfectionAnti-viral ImmunityClonal ExpansionClonal Expansion Of LymphocytesDiverse RepertoireEffector RepertoiresT Cell Clonal Expansion
Abstract Vδ2 + T cells form the predominant human γδ T-cell population in peripheral blood and mediate T-cell receptor (TCR)-dependent anti-microbial and anti-tumour immunity. Here we show that the Vδ2 + compartment comprises both innate-like and adaptive subsets. Vγ9 + Vδ2 + T cells display semi-invariant TCR repertoires, featuring public Vγ9 TCR sequences equivalent in cord and adult blood. By contrast, we also identify a separate, Vγ9 − Vδ2 + T-cell subset that typically has a CD27 hi CCR7 + CD28 + IL-7Rα + naive-like phenotype and a diverse TCR repertoire, however in response to viral infection, undergoes clonal expansion and differentiation to a CD27 lo CD45RA + CX 3 CR1 + granzymeA/B + effector phenotype. Consistent with a function in solid tissue immunosurveillance, we detect human intrahepatic Vγ9 − Vδ2 + T cells featuring dominant clonal expansions and an effector phenotype. These findings redefine human γδ T-cell subsets by delineating the Vδ2 + T-cell compartment into innate-like (Vγ9 + ) and adaptive (Vγ9 − ) subsets, which have distinct functions in microbial immunosurveillance.
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VDJtools: Unifying Post-analysis of T Cell Receptor Repertoires
Mikhail Shugay, Dmitriy V. Bagaev, Maria A. Turchaninova et al. · PLoS Computational Biology · 2015 · 650 citations · Full text
Martin Christen Frølund Thomsen, Morten Nielsen · Nucleic Acids Research · 2012 · 464 citations · Full text