Concepedia

Metatranscriptome of human faecal microbial communities in a cohort of adult men

Galeb Abu-Ali, Raaj S. Mehta, Jason Lloyd‐Price, Himel Mallick, Tobyn Branck, Kerry L. Ivey, David A. Drew, Casey DuLong, Eric B. Rimm, Jacques Izard,

Nature Microbiology · 2018 · 250 citations · 35 references

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35

Trimmomatic: a flexible trimmer for Illumina sequence data

Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text

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Fast gapped-read alignment with Bowtie 2

Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations

, , +11

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

Journal of Molecular Evolution · 1980 · 29.8K citations

, , +15

Fast and sensitive protein alignment using DIAMOND

Benjamin Buchfink, Chao Xie, Daniel H. Huson · Nature Methods · 2014 · 15.2K citations

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Structure, function and diversity of the healthy human microbiome

Curtis Huttenhower, J. Fah Sathirapongsasuti, Nicola Segata et al. · Nature · 2012 · 11.9K citations · Full text

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