Nature · 2017 · 894 citations · 44 references
MedicineMolecular BiologyOncologyCancer ImmunologyImmunotherapyMolecular OncologyCancer ImmunoeditingCancer ImmunosurveillanceCancer ImmunotherapyPersonalized ImmunotherapyTumor AntigensTumor ImmunopathologyCancer AntigensCancer Cell-intrinsic Immune ResistanceCancer Immunotherapy ResistanceCancer-associated ImmunosuppressionTumor Immunogenomics
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Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text
Fast gapped-read alignment with Bowtie 2
Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations
Cutadapt removes adapter sequences from high-throughput sequencing reads
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Medicine, Bioinformatics, Oncology +15