Scientific Reports · 2017 · 54 citations · 33 references
HumanitiesArchaeologyEvolutionary BiologyMitochondrial GeneticsPhylogeographyPrehistoric ArchaeologyAncient ChinaAncient DnaAnimal GeneticsDomesticationMitochondrial Population GeneticsPrehistoric Near Eastern ArchaeologyCenters Of DomesticationHuman Migration HistoryIndependent Domestication CentersMaternal Lineage InferenceMaternal Lineage TracingMitochondrial Dna GeneticsNeolithic TransitionPig Domestication
It is widely accepted that modern pigs were domesticated independently at least twice, and Chinese native pigs are deemed as direct descendants of the first domesticated pigs in the corresponding domestication centers. By analyzing mitochondrial DNA sequences of an extensive sample set spanning 10,000 years, we find that the earliest pigs from the middle Yellow River region already carried the maternal lineages that are dominant in both younger archaeological populations and modern Chinese pigs. Our data set also supports early Neolithic pig utilization and a long-term in situ origin for northeastern Chinese pigs during 8,000-3,500 BP, suggesting a possibly independent domestication in northeast China. Additionally, we observe a genetic replacement in ancient northeast Chinese pigs since 3,500 BP. The results not only provide increasing evidence for pig origin in the middle Yellow River region but also depict an outline for the process of early pig domestication in northeast China.
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MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
Koichiro Tamura, Glen Stecher, Daniel S. Peterson et al. · Molecular Biology and Evolution · 2013 · 47.9K citations · Full text
MUSCLE: multiple sequence alignment with high accuracy and high throughput
R. C. Edgar · Nucleic Acids Research · 2004 · 46.5K citations · Full text