Concepedia

Progenitor strain introduction of Mycobacterium bovis at the wildlife-livestock interface can lead to clonal expansion of the disease in a single ecosystem

Anzaan Dippenaar, Sven D.C. Parsons, Michele A. Miller, Tiny M. Hlokwe, Nicolaas C. Gey van Pittius, Sabir A. Adroub, Abdallah M. Abdallah, Arnab Pain, Robin M. Warren, Anita L. Michel,

Infection Genetics and Evolution · 2017 · 38 citations · 20 references

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20

Trimmomatic: a flexible trimmer for Illumina sequence data

Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text

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Fast and accurate short read alignment with Burrows–Wheeler transform

Heng Li, Richard Durbin · Bioinformatics · 2009 · 62.8K citations · Full text

, , +12

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

Alexandros Stamatakis · Bioinformatics · 2014 · 34.3K citations · Full text

, , +12

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

Aaron McKenna, Matthew G. Hanna, Eric Banks et al. · Genome Research · 2010 · 30K citations · Full text

, , +17

PHYLIP-Phylogeny inference package (Version 3.2)

Joe Felsenstein · Cladistics · 1989 · 17.9K citations

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