Concepedia

RNA Seq analysis for transcriptome profiling in response to classical swine fever vaccination in indigenous and crossbred pigs

Shalu Kumari Pathak, Amit Kumar, G. Bhuwana, Vaishali Sah, Vikramadiya Upmanyu, Ashok Kumar Tiwari, Aditya Prasad Sahoo, Amit Ranjan Sahoo, Sajad A. Wani, Manjit Panigrahi,

Functional & Integrative Genomics · 2017 · 16 citations · 29 references

DOI

Concepts

References

29

Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks

Paul Shannon, Andrew Markiel, Owen Ozier et al. · Genome Research · 2003 · 54.3K citations · Full text

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

Ben Langmead, Cole Trapnell, Mihai Pop et al. · Genome biology · 2009 · 23K citations · Full text

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Differential expression analysis for sequence count data

Simon Anders, Wolfgang Huber · Genome biology · 2010 · 16.4K citations · Full text

, , +15

A scaling normalization method for differential expression analysis of RNA-seq data

Mark D. Robinson, Alicia Oshlack · Genome biology · 2010 · 8.6K citations · Full text

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g:Profiler—a web server for functional interpretation of gene lists (2016 update)

Jüri Reimand, T. V. Arak, Priit Adler et al. · Nucleic Acids Research · 2016 · 1.4K citations · Full text

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