Genomics Data · 2017 · 14 citations · 11 references
AgriculturePlant PathologyPlant SciencesGenomicsPlant GenomicsPlant-microbe InteractionsFungal PathogenesisPathogen GenomicsPlant Disease ResistancePlant PathogenesisPlant-pathogen InteractionsPlant-pathogenic FungiFungal Pathogenicity FactorsLeaf Spot ResistancePathogen Genome SequencingPathogen-plant InteractionsPathogenicity DeterminantsPathogenicity GenomicsPlant Pathogen DetectionSoybean Production
Fungi are the causal agents of many of the world's most serious plant diseases causing disastrous consequences for large-scale agricultural production. Pathogenicity genomic basis is complex in fungi as multicellular eukaryotic pathogens. The fungus Cercospora sojina is a plant pathogen that threatens global soybean supplies. Here, we report the genome sequence of C. sojina strain S9 and detect genome features and predicted genomic elements. The genome sequence of C. sojina is a valuable resource with potential in studying the fungal pathogenicity and soybean host resistance to frogeye leaf spot (FLS), which is caused by C. sojina. The C. sojina genome sequence has been deposited and available at DDBJ/EMBL/GenBank under the project accession number AHPQ00000000.
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The Pfam Protein Families Database
Alex Bateman · Nucleic Acids Research · 2002 · 14.2K citations · Full text
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
Daniel R. Zerbino, Ewan Birney · Genome Research · 2008 · 9.7K citations · Full text
RNAmmer: consistent and rapid annotation of ribosomal RNA genes
Karin Lagesen, Peter F. Hallin, Einar Andreas Rødland et al. · Nucleic Acids Research · 2007 · 6.3K citations · Full text