Genome Announcements · 2017 · 15 citations · 9 references
Life SciencesMicrobiologyMolecular BiologyGenomicsMolecular VirologyVirologyEncephalitisGenome SequencingViral Genome OrganizationViral InfectionsViral PathogenesisVirus Genome OrganizationHerpes Simplex Virus EncephalitisNeurotropic Viral InfectionNeurotropic Viral PathogenesisViral EncephalitisWhole-genome Sequence Analysis
Herpes simplex virus 1 (HSV-1), also known as Human herpesvirus 1, is a highly prevalent human neurotropic pathogen that causes a variety of diseases, including lethal encephalitis. Here, we report the genome sequence of the HSV-1 strain SC16.
9
Fast gapped-read alignment with Bowtie 2
Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations
SOAPdenovo2: an empirically improved memory-efficient short-read <i>de novo</i> assembler
Ruibang Luo, Binghang Liu, Yinlong Xie et al. · GigaScience · 2012 · 5.6K citations · Full text
Quality control and preprocessing of metagenomic datasets
Robert Schmieder, Robert A. Edwards · Bioinformatics · 2011 · 5.4K citations · Full text