Concepedia

Composition of Gut Microbiota in the Gibel Carp (Carassius auratus gibelio) Varies with Host Development

Xinghao Li, Li Zhou, Yuhe Yu, Jiajia Ni, Wenjie Xu, Qingyun Yan

Microbial Ecology · 2017 · 140 citations · 46 references

DOI

Concepts

References

46

R: A Language and Environment for Statistical Computing

R Core Team · 2000 · 353K citations · Full text

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phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

Paul J. McMurdie, Susan Holmes · PLoS ONE · 2013 · 22.5K citations · Full text

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PAST: PALEONTOLOGICAL STATISTICAL SOFTWARE PACKAGE FOR EDUCATION AND DATA ANALYSIS

Øyvind Hammer, David A. T. Harper, Paul D. Ryan · Palaeontologia Electronica · 2001 · 18K citations · Full text

, , +5

UPARSE: highly accurate OTU sequences from microbial amplicon reads

R. C. Edgar · Nature Methods · 2013 · 17.3K citations

, , +14

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

J. Gregory Caporaso, Christian L. Lauber, William A. Walters et al. · The ISME Journal · 2012 · 9.1K citations · Full text

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