Concepedia

The microenvironment of injured murine gut elicits a local pro-restitutive microbiota

Ashfaqul Alam, Giovanna Leoni, Miguel Quirós, Huixia Wu, Chirayu Desai, Hikaru Nishio, Rheinallt M. Jones, Asma Nusrat, Andrew S. Neish

Nature Microbiology · 2016 · 258 citations · 28 references

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28

Metagenomic biomarker discovery and explanation

Nicola Segata, Jacques Izard, Levi Waldron et al. · Genome biology · 2011 · 16.7K citations · Full text

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Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

J. Gregory Caporaso, Christian L. Lauber, William A. Walters et al. · The ISME Journal · 2012 · 9.1K citations · Full text

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UniFrac: a New Phylogenetic Method for Comparing Microbial Communities

Catherine Lozupone, Rob Knight · Applied and Environmental Microbiology · 2005 · 8.6K citations · Full text

, , +16

FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix

Morgan N. Price, Paramvir Dehal, Adam P. Arkin · Molecular Biology and Evolution · 2009 · 5.9K citations · Full text

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An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

Daniel McDonald, Morgan N. Price, Julia K. Goodrich et al. · The ISME Journal · 2011 · 5.3K citations · Full text

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