Concepedia

An inducible long noncoding RNA amplifies DNA damage signaling

Adam M. Schmitt, Julia T. Garcia, Tiffany Hung, Ryan A. Flynn, Ying Shen, Kun Qu, Alexander Y. Payumo, Ashwin Peres-da-Silva, Daniela Kenzelmann Brož, Rachel Baum,

Nature Genetics · 2016 · 240 citations · 39 references

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39

The Sequence Alignment/Map format and SAMtools

Heng Li, Alec Wysoker, Tim Fennell et al. · Bioinformatics · 2009 · 67.5K citations · Full text

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

Ben Langmead, Cole Trapnell, Mihai Pop et al. · Genome biology · 2009 · 23K citations · Full text

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Model-based Analysis of ChIP-Seq (MACS)

Yong Zhang, Tao Liu, Clifford A. Meyer et al. · Genome biology · 2008 · 19.9K citations · Full text

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MEME SUITE: tools for motif discovery and searching

Timothy L. Bailey, Mikael Bodén, Fabian A. Buske et al. · Nucleic Acids Research · 2009 · 11.5K citations · Full text

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Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position

Jason D. Buenrostro, Paul G. Giresi, Lisa C. Zaba et al. · Nature Methods · 2013 · 7K citations · Full text

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