Concepedia

Inferring expressed genes by whole-genome sequencing of plasma DNA

Peter Ulz, Gerhard Thallinger, Martina Auer, Ricarda Graf, Karl Kashofer, Stephan Jahn, Luca Abete, Gunda Pristauz, Edgar Petru, Jochen B. Geigl,

Nature Genetics · 2016 · 454 citations · 28 references

DOI

Concepts

References

28

The Sequence Alignment/Map format and SAMtools

Heng Li, Alec Wysoker, Tim Fennell et al. · Bioinformatics · 2009 · 67.5K citations · Full text

, , +17

Fast and accurate short read alignment with Burrows–Wheeler transform

Heng Li, Richard Durbin · Bioinformatics · 2009 · 62.8K citations · Full text

, , +12

An integrated encyclopedia of DNA elements in the human genome

Nature · 2012 · 19.4K citations · Full text

, , +16

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

Cole Trapnell, Adam Roberts, Loyal A. Goff et al. · Nature Protocols · 2012 · 12.9K citations · Full text

, , +12

Detection of Circulating Tumor DNA in Early- and Late-Stage Human Malignancies

Chetan Bettegowda, Mark Sausen, Rebecca Leary et al. · Science Translational Medicine · 2014 · 5.1K citations · Full text

, , +17