Concepedia

Comparative transcriptomics of rice plants under cold, iron, and salt stresses

Marcelo Nogueira do Amaral, Luis Willian Pacheco Arge, Letícia Carvalho Benitez, Rodrigo Danielowski, Solange Ferreira da Silveira Silveira, Daniel da Rosa Farias, Antônio Costa de Oliveira, Eugênia Jacira Bolacel Braga

Functional & Integrative Genomics · 2016 · 61 citations · 67 references

DOI

Concepts

References

67

Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

Kenneth J. Livak, Thomas D. Schmittgen · Methods · 2001 · 181.5K citations

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Trimmomatic: a flexible trimmer for Illumina sequence data

Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text

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Mutation of the mouse klotho gene leads to a syndrome resembling ageing.

PubMed · 1997 · 66.6K citations

, , +17

Fast gapped-read alignment with Bowtie 2

Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations

, , +11

<tt>edgeR</tt> : a Bioconductor package for differential expression analysis of digital gene expression data

Mark D. Robinson, Davis J. McCarthy, Gordon K. Smyth · Bioinformatics · 2009 · 44.5K citations · Full text

, , +14