Molecular & Cellular Proteomics · 2016 · 50 citations · 62 references
Life SciencesBiochemistryCell BiologyCytoskeletonMorphogenesisProteomicsCytoskeletal Associated ProteinsFunctional ProteomicsProtein Complex AnalysisProtein-protein Interaction AnalysisProtein-protein Interaction NetworksCell Division CytoskeletonMicrotubule Severing ProteinsMicrotubule SignalingMicrotubule-associated Protein 1Microtubule-based Motility
The Katanin family of microtubule-severing enzymes is critical for remodeling microtubule-based structures that influence cell division, motility, morphogenesis and signaling. Katanin is composed of a catalytic p60 subunit (A subunit, KATNA1) and a regulatory p80 subunit (B subunit, KATNB1). The mammalian genome also encodes two additional A-like subunits (KATNAL1 and KATNAL2) and one additional B-like subunit (KATNBL1) that have remained poorly characterized. To better understand the factors and mechanisms controlling mammalian microtubule-severing, we have taken a mass proteomic approach to define the protein interaction module for each mammalian Katanin subunit and to generate the mammalian Katanin family interaction network (Katan-ome). Further, we have analyzed the function of the KATNBL1 subunit and determined that it associates with KATNA1 and KATNAL1, it localizes to the spindle poles only during mitosis and it regulates Katanin A subunit microtubule-severing activity in vitro Interestingly, during interphase, KATNBL1 is sequestered in the nucleus through an N-terminal nuclear localization signal. Finally KATNB1 was able to compete the interaction of KATNBL1 with KATNA1 and KATNAL1. These data indicate that KATNBL1 functions as a regulator of Katanin A subunit microtubule-severing activity during mitosis and that it likely coordinates with KATNB1 to perform this function.
62
Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks
Paul Shannon, Andrew Markiel, Owen Ozier et al. · Genome Research · 2003 · 54.3K citations · Full text
The CRAPome: a contaminant repository for affinity purification–mass spectrometry data
Dattatreya Mellacheruvu, Zachary Wright, Amber L. Couzens et al. · Nature Methods · 2013 · 1.8K citations · Full text
Pharmacy, Chemistry, Toxicology +12
Shunichi Kosugi, Masako Hasebe, Masaru Tomita et al. · Proceedings of the National Academy of Sciences · 2009 · 1.3K citations · Full text
GeneCards: integrating information about genes, proteins and diseases
Michael Rebhan · Trends in Genetics · 1997 · 814 citations