Chemical Communications · 2016 · 84 citations · 23 references
PharmacyBiotechnologyMolecular BiologyNatural Product BiosynthesisBiosynthetic Gene ClustersPlant Natural Product BiosynthesisBiosynthetic Gene Cluster AnalysisBiosynthetic Pathway AnalysisIn-vitro CharacterizationNatural Product Biosynthesis Gene DiscoveryNovel Analogue GenerationPrecursor Biosynthetic Gene Clusters
A gene cluster responsible for the biosynthesis of squalestatin S1 (SQS1, 1) was identified by full genome sequencing of two SQS1-producing ascomycetes: Phoma sp. C2932 and unidentified fungus MF5453. A transformation protocol was established and a subsequent knockout of one PKS gene from the cluster led to loss of SQS1 production and enhanced concentration of an SQS1 precursor. An acyltransferase gene from the cluster was expressed in E. coli and the expressed protein MfM4 shown to be responsible for loading acyl groups from CoA onto the squalestatin core as the final step of biosynthesis. MfM4 appears to have a broad substrate selectivity for its acyl CoA substrate, allowing the in vitro synthesis of novel squalestatins.
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The Phyre2 web portal for protein modeling, prediction and analysis
Lawrence A. Kelley, Stefans Mezulis, Christopher M. Yates et al. · Nature Protocols · 2015 · 10.2K citations · Full text
Crystal Structure of Human Squalene Synthase
Jayvardhan Pandit, Dennis E. Danley, Gayle K. Schulte et al. · Journal of Biological Chemistry · 2000 · 237 citations · Full text