The Journal of Physical Chemistry Letters · 2012 · 106 citations · 23 references
Natural SciencesBiochemistryChemistryProtein FoldingQuantum ChemistrySpectroscopyHydrogen Bonding In BiomoleculesMacromolecular StructureProtein ConformationProtein StructureSecondary StructureSecondary Structure FormationChainsHydrogen Bonding PatternsHydrogen Bonds In Protein FoldingHydrogen Bonds In Protein StabilityMethionine-derived Sulfur CompoundsProtein Backbone Hydrogen BondsProtein Structural ChangesSpectroscopic Characterization
Despite of being ubiquitous in proteins, NHbackbone···S hydrogen bonds linking the sulfur atom of methionine or cysteine to backbone NH groups remain poorly documented. Here, we report vibrationally resolved IR NH stretch spectra of two methionine-containing dipeptides (Ac-Phe-Met-NH2 and Ac-Met-Phe-NH2). The conformations observed for both molecules, assigned with the help of DFT-D quantum chemistry, provide spectroscopic evidence for the formation of NHbackbone···S H-bonds, surprisingly strong enough to challenge the classical intrabackbone NH···O═C H-bonds. The methionine side chain is found to fold locally, forming a H-bond with the neighboring amide groups (NH(i) or NH(i+1)). Comparison with protein data bank structural information shows that such a local folding is also common in proteins where it concerns 24% of the methionine residues that have a sulfur atom linked to a backbone NH group. This convergence between the strength of these NH···S H-bonds and protein structural data illustrates their contribution to the stability of protein chains.
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