PLoS Genetics · 2016 · 26 citations · 92 references
Life SciencesBiologyMolecular BiologyMorphogenesisMycologyNuclear OrganizationFungal BiochemistryFungal Cell BiologyFungal CytologyFungal DevelopmentFungal MorphologyAsexual DevelopmentDevelopmental Genetics Of FungiFungal MorphogenesisFungal NucleusFungal SeptationPhosphorylation-dependent Protein InteractionsPhosphorylation-dependent RegulationVegetative Growth Regulation
DenA/DEN1 and the COP9 signalosome (CSN) represent two deneddylases which remove the ubiquitin-like Nedd8 from modified target proteins and are required for distinct fungal developmental programmes. The cellular DenA/DEN1 population is divided into a nuclear and a cytoplasmatic subpopulation which is especially enriched at septa. DenA/DEN1 stability control mechanisms are different for the two cellular subpopulations and depend on different physical interacting proteins and the C-terminal DenA/DEN1 phosphorylation pattern. Nuclear DenA/DEN1 is destabilized during fungal development by five of the eight CSN subunits which target nuclear DenA/DEN1 for degradation. DenA/DEN1 becomes stabilized as a phosphoprotein at S243/S245 during vegetative growth, which is necessary to support further asexual development. After the initial phase of development, the newly identified cytoplasmatic DenA/DEN1 interacting phosphatase DipA and an additional developmental specific C-terminal phosphorylation site at serine S253 destabilize DenA/DEN1. Outside of the nucleus, DipA is co-transported with DenA/DEN1 in the cytoplasm between septa and nuclei. Deletion of dipA resulted in increased DenA/DEN1 stability in a strain which is unresponsive to illumination. The mutant strain is dysregulated in cytokinesis and impaired in asexual development. Our results suggest a dual phosphorylation-dependent DenA/DEN1 stability control with stabilizing and destabilizing modifications and physical interaction partner proteins which function as control points in the nucleus and the cytoplasm.
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Multiple sequence alignment with hierarchical clustering
F. Corpet · Nucleic Acids Research · 1988 · 5.4K citations · Full text
CDD: NCBI's conserved domain database
Aron Marchler‐Bauer, Myra K. Derbyshire, Noreen R. Gonzales et al. · Nucleic Acids Research · 2014 · 3.6K citations · Full text
Global, In Vivo, and Site-Specific Phosphorylation Dynamics in Signaling Networks
Jesper V. Olsen, Blagoy Blagoev, Florian Gnad et al. · Cell · 2006 · 3.6K citations · Full text