Methods in molecular biology · 2015 · 930 citations · 51 references
51
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text
An integrated encyclopedia of DNA elements in the human genome
TopHat: discovering splice junctions with RNA-Seq
Cole Trapnell, Lior Pachter, Steven L. Salzberg · Bioinformatics · 2009 · 12.1K citations · Full text
Circular RNAs are a large class of animal RNAs with regulatory potency
Sebastian Memczak, Marvin Jens, Antigoni Elefsinioti et al. · Nature · 2013 · 8.5K citations
Natural RNA circles function as efficient microRNA sponges
Thomas B. Hansen, Trine I. Jensen, Bettina Hjelm Clausen et al. · Nature · 2013 · 8.5K citations