PhyloFacts: an online structural phylogenomic encyclopedia for protein functional and structural classification

Gene Ontology: tool for the unification of biology

Michael Ashburner, Catherine A. Ball, Judith A. Blake et al. · Nature Genetics · 2000 · 43.3K citations · Full text

Functional Genomics, Engineering, Bioinformatics Database +11

The Protein Data Bank

Helen M. Berman · Nucleic Acids Research · 2000 · 38.9K citations

Biological Database, Biochemistry, Structural Bioinformatics +12

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

Stéphane Guindon, Olivier Gascuel · Systematic Biology · 2003 · 16.8K citations · Full text

The Pfam Protein Families Database

Alex Bateman · Nucleic Acids Research · 2002 · 14.2K citations · Full text

Bioinformatics, Biochemistry, Structural Bioinformatics +12

PAUP^* : Phylogenetic Analysis Using Parsimony (and other methods) 4.0b8

David L. Swofford · 2001 · 12.8K citations