Applied and Environmental Microbiology · 2014 · 69 citations · 43 references
Life SciencesBiologyMicrobiologyMicrobial MetabolismPhotosynthesisTranscriptomicsMicrobial TranscriptomicsPhotosynthesis In MicroorganismsPhotosynthetic Gene ExpressionPhotosynthetic MetabolismPhotosystem IPhotosystem IiBacterial Energy MetabolismBloom-forming CyanobacteriaCarbon Source LimitationMicrobial Carbon LimitationPhotosynthetic Gene RegulationPhotosynthetic Stress ResponsesPhotosystem Ii Gene ExpressionTranscriptional Regulation Of Photosynthesis
Recent studies have provided evidence for both intracellular and extracellular roles of the potent hepatotoxin microcystin (MC) in the bloom-forming cyanobacterium Microcystis. Here, we surveyed transcriptomes of the wild-type strain M. aeruginosa PCC 7806 and the microcystin-deficient ΔmcyB mutant under low light conditions with and without the addition of external MC of the LR variant (MC-LR). Transcriptomic data acquired by microarray and quantitative PCR revealed substantial differences in the relative expression of genes of the central intermediary metabolism, photosynthesis, and energy metabolism. In particular, the data provide evidence for a lower photosystem I (PSI)-to-photosystem II (PSII) ratio and a more pronounced carbon limitation in the microcystin-deficient mutant. Interestingly, only 6% of the transcriptional differences could be complemented by external microcystin-LR addition. This MC signaling effect was seen exclusively for genes of the secondary metabolism category. The orphan polyketide synthase gene cluster IPF38-51 was specifically downregulated in response to external MC-LR under low light. Our data suggest a hierarchical and light-dependent cross talk of secondary metabolites and support both an intracellular and an extracellular role of MC in Microcystis.
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R: A Language and Environment for Statistical Computing
R Core Team · 2000 · 353K citations · Full text
Natural Sciences, Computer Science, Statistical Computing +10
Generic Assignments, Strain Histories and Properties of Pure Cultures of Cyanobacteria
Rosmarie Rippka, Roger Y. Stanier, Josette Deruelles et al. · Microbiology · 1979 · 7.7K citations
Life Sciences, Biology, Microbiology +17
Normalization of cDNA microarray data
Gordon K. Smyth · Methods · 2003 · 1.9K citations