Nucleic Acids Research · 2008 · 2.8K citations · 23 references
Life SciencesBioinformaticsMolecular BiologySequence AnalysisStructural BioinformaticsStructural BiologyRna BiophysicsRna FoldingRna StructureSequence AlignmentStructural AlignmentBarriersRna Folding PredictionRna Folding ThermodynamicsRna Structural MotifsRna Structure PredictionRna Tertiary Structure DesignRna-rna InteractionsWeb Services
The Vienna RNA Websuite is a comprehensive collection of tools for folding, design and analysis of RNA sequences. It provides a web interface to the most commonly used programs of the Vienna RNA package, including folding of single and aligned sequences, prediction of RNA‑RNA interactions, design of sequences with a given structure, analysis of folding landscapes using the barriers program, and structural RNA alignments using LocARNA. The web server and downloadable software packages are freely accessible at http://rna.tbi.univie.ac.at/.
The Vienna RNA Websuite is a comprehensive collection of tools for folding, design and analysis of RNA sequences. It provides a web interface to the most commonly used programs of the Vienna RNA package. Among them, we find folding of single and aligned sequences, prediction of RNA-RNA interactions, and design of sequences with a given structure. Additionally, we provide analysis of folding landscapes using the barriers program and structural RNA alignments using LocARNA. The web server together with software packages for download is freely accessible at http://rna.tbi.univie.ac.at/.
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Obesity Surgery · 1997 · 3.9K citations
Vienna RNA secondary structure server
Ivo L. Hofacker · Nucleic Acids Research · 2003 · 2.4K citations · Full text