Genome biology · 2004 · 126 citations · 43 references
Life SciencesGeneticsMolecular BiologyComparative GenomicsGene ExpressionGenomicsConservation GenomicsCross-species Gene ExpressionGene Expression ProfilingOrthology InferenceOrtholog Mapping In TranscriptomicsOrthologous Gene AnalysisOrthologous Gene ComparisonOrthologous Gene Expression AnalysisOrthologous Region IdentificationOrthology AnalysisOrthology Assessment
Microarray-driven gene-expression profiles are generally produced and analyzed for a single specific experimental model. We have assessed an analytical approach that simultaneously evaluates multi-species experimental models within a particular biological condition using orthologous genes as linkers for the various Affymetrix microarray platforms on multi-species models of ventilator-associated lung injury. The results suggest that this approach may be a useful tool in the evaluation of biological processes of interest and selection of process-related candidate genes.
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Summaries of Affymetrix GeneChip probe level data
Rafael A. Irizarry · Nucleic Acids Research · 2003 · 5K citations · Full text
A molecular signature of metastasis in primary solid tumors
Sridhar Ramaswamy, Ken N. Ross, Eric S. Lander et al. · Nature Genetics · 2002 · 2.5K citations