Orthologous gene-expression profiling in multi-species models: search for candidate genes

Dmitry N. Grigoryev, Shwu‐Fan Ma, Rafael A. Irizarry, Shui Qing Ye, John Quackenbush, Joe G. N. Garcia

Genome biology · 2004 · 126 citations · 43 references

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Abstract

Microarray-driven gene-expression profiles are generally produced and analyzed for a single specific experimental model. We have assessed an analytical approach that simultaneously evaluates multi-species experimental models within a particular biological condition using orthologous genes as linkers for the various Affymetrix microarray platforms on multi-species models of ventilator-associated lung injury. The results suggest that this approach may be a useful tool in the evaluation of biological processes of interest and selection of process-related candidate genes.

References

43