Proceedings of the National Academy of Sciences · 2008 · 98 citations · 23 references
Natural SciencesBiochemistryPhysicsComputational ChemistryMolecular BiophysicsProtein FoldingCoarse-grained ModelingFolding KineticsMacromolecular FoldingProtein Folding PathwaysProtein Folding ThermodynamicsProtein StructureCoarse-grained Folding ModelsExperimental StudiesFolding PathwaysKinetic Folding PathwaysMolecular Folding TransitionsProtein Folding EnergeticsProtein Folding Free Energy LandscapeStatistical Mechanical Models Of Folding
In contrast to classical chemical phenomenology, theory suggests that proteins may undergo downhill folding without an activation barrier under certain thermodynamic conditions. Recently, the BBL protein was proposed to fold by such a downhill scenario, but discrepancies between experimental results found in different groups argue against this. After briefly reviewing the major experimental studies of the BBL folding mechanism, we show that simulations of both coarse-grained and atomistic models can reconcile the seemingly conflicting observations.
23
Wei Yang, Martin Gruebele · Nature · 2003 · 401 citations
Experimental Identification of Downhill Protein Folding
María M. García‐Mira, Mourad Sadqi, N. Fischer et al. · Science · 2002 · 307 citations
Extremely rapid protein folding in the absence of intermediates
Thomas H. Schindler, Michael Herrler, Mohamed A. Marahiel et al. · Nature Structural Biology · 1995 · 282 citations
Atom-by-atom analysis of global downhill protein folding
Mourad Sadqi, David Fushman, Víctor Muñoz · Nature · 2006 · 248 citations