Bioinformatics · 1998 · 65 citations · 0 references
Life SciencesBioinformaticsBiologyComputational BiologyGenomicsSequence AnalysisFunctional GenomicsGenome AnnotationGenomic AnnotationProtein Database SearchSequence AnnotationTaxonomic ClassificationAutomatic ClassificationFunctional Annotation DatabasesFunctional Annotation Of GenomesFunctional Annotation Of ProteinsGenome Annotation DatabasesProtein AnnotationProtein Family ClassificationProtein Sequence Database Construction
UNLABELLED: A tool is described for the automatic classification of sequences in functional classes using their database annotations. The Euclid system is based on a simple learning procedure from examples provided by human experts. AVAILABILITY: Euclid is freely available for academics at http://www.gredos.cnb.uam.es/EUCLID, with the corresponding dictionaries for the generation of three, eight and 14 functional classes. CONTACT: E-mail: valencia@cnb.uam.es SUPPLEMENTARY INFORMATION: The results of the EUCLID classification of different genomes are available at http://www.sander.ebi.ac. uk/genequiz/. A detailed description of the different applications mentioned in the text is available at http://www.gredos.cnb.uam. es/EUCLID/Full_Paper