Arthritis Research & Therapy · 2012 · 37 citations · 32 references
Life SciencesGeneticsMolecular GeneticsAutoimmunityHuman GeneticsImmunogeneticsAutoimmune DiseasesDisease Susceptibility LociGenetic SusceptibilityGenetic Susceptibility To AutoimmunityHaplotype AnalysisSystemic SclerosisAutoimmune Disease GeneticsDisease-specific Susceptibility LociGenetic Risk VariantsHaplotype Block ConstructionHaplotype Frequency AnalysisHaplotype VariationLung Fibrosis
INTRODUCTION: CD226 genetic variants have been associated with a number of autoimmune diseases and recently with systemic sclerosis (SSc). The aim of this study was to test the influence of CD226 loci in SSc susceptibility, clinical phenotypes and autoantibody status in a large multicenter European population. METHODS: A total of seven European populations of Caucasian ancestry were included, comprising 2,131 patients with SSc and 3,966 healthy controls. Three CD226 single nucleotide polymorphisms (SNPs), rs763361, rs3479968 and rs727088, were genotyped using Taqman 5'allelic discrimination assays. RESULTS: Pooled analyses showed no evidence of association of the three SNPs, neither with the global disease nor with the analyzed subphenotypes. However, haplotype block analysis revealed a significant association for the TCG haplotype (SNP order: rs763361, rs34794968, rs727088) with lung fibrosis positive patients (PBonf = 3.18E-02 OR 1.27 (1.05 to 1.54)). CONCLUSION: Our data suggest that the tested genetic variants do not individually influence SSc susceptibility but a CD226 three-variant haplotype is related with genetic predisposition to SSc-related pulmonary fibrosis.
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Scleroderma (systemic sclerosis): classification, subsets and pathogenesis
E. Carwile LeRoy, Casilda G. Black, Raúl Fleischmajer et al. · 2001 · 4K citations
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Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes
John A. Todd, Neil Walker, Jason D. Cooper et al. · Nature Genetics · 2007 · 1.5K citations · Full text