Organic & Biomolecular Chemistry · 2005 · 15 citations · 40 references
Natural SciencesBiochemistryChemistryBiocatalysisCatalysisEnzyme MechanismCatalytic MechanismsCatalytic Reaction KineticsEnzymatic CatalysisEnzyme CatalysisEnzyme KineticsActivation EnergyCatalytic Acid-base CatalysisEnzymatic Reaction MechanismsGeneral Acid CatalysisGeneral Acid-base CatalysisGeneral Base CatalysisIntramolecular CatalysisThermodynamics Of Enzyme Catalysis
The possible catalytic effect of the vicinal hydroxyl group during the ammonolysis of acetylcatechol has been studied by first principle calculations. A very efficient intramolecular catalysis was found to occur when the catechol ester o-OH group is deprotonated: the activation energy of the ammonolysis decreases by 24 kcal mol(-1) as compared to that of acetylphenol ammonolysis. Using this value, the o-oxyanion-catalysed intramolecular ammonolysis was estimated to be orders of magnitude faster than the ammonolysis of acetylphenol or nonionised acetylcatechol. The analogy with the aminolysis of peptidyl-tRNA that occurs during protein biosynthesis implies several orders of magnitude acceleration due to complete or partial deprotonation of its 3'-terminal adenosine 2'-OH providing a mechanistic possibility for general acid-base catalysis by the ribosome.
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Density-functional thermochemistry. III. The role of exact exchange
Axel D. Becke · The Journal of Chemical Physics · 1993 · 102.8K citations
Natural Sciences, Chemistry, Physics +13
General atomic and molecular electronic structure system
Michael W. Schmidt, Kim K. Baldridge, Jerry A. Boatz et al. · Journal of Computational Chemistry · 1993 · 20.2K citations
Natural Sciences, Chemistry, Physics +17