Protein Science · 2000 · 130 citations · 20 references
Life SciencesBiochemistryBiophysicsMolecular BiophysicsSpectroscopyStructural BiologyConformational ChangeConformational DynamicsLigand BindingProtein ConformationProtein StructureSolution-state Magnetic ResonanceConformational Change Upon BindingConformational Transition StatesConformational TransitionsPh DependencePh Dependence Of FoldingPh-dependent FoldingPh-dependent StructureTransition States In Conformational Changes
NMR spectroscopic changes as a function of pH in solutions of the pheromone-binding protein of Bombyx mori (BmPBP) show that BmPBP undergoes a conformational transition between pH 4.9 and 6.0. At pH below 4.9 there is a single "acid form" (A), and a homogeneous "basic form" (B) exists at pH above 6.0. Between pH 5 and 6, BmPBP exists as a mixture of A and B in slow exchange on the NMR chemical shift time scale, with the transition midpoint at pH 5.4. The form B has a well-dispersed NMR spectrum, indicating that it represents a more structured, "closed" conformation than form A, which has a significantly narrower chemical shift dispersion. Conformational transitions of the kind observed here may explain heterogeneity reported for a variety of odorant-binding proteins, and it will be of interest to further investigate possible correlations with pH-dependent regulation of ligand binding and release in the biological function of this class of proteins.
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NMR with Proteins and Nucleic Acids
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Processing of multi-dimensional NMR data with the new software PROSA
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