Human Genomics · 2008 · 804 citations · 16 references
Life SciencesBiochemistryMolecular BiologyBiological Transport PhenomenaGenome EvolutionIntracellular TransportCellular Drug EffluxCystic FibrosisMembrane TransportTransport Across Biological MembranesTransport In CellsAbc TransportersAdenosine Triphosphate-binding Cassette TransportersAtp-binding Cassette TransportersEndogenous Transporter SubstratesMembrane Transporter FamiliesMembrane Transporter SubstratesPumpsTransporters
ABC transporters are ATP-powered pumps ubiquitous across prokaryotes, plants, fungi, yeast, and animals, moving diverse substrates such as ions, peptides, sugars, and hydrophobic compounds, and the human genome encodes 49 genes in eight subfamilies. Mutations in at least 11 of these genes cause severe inherited diseases such as cystic fibrosis and X‑linked adrenoleukodystrophy, underscoring their clinical importance.
There exist four fundamentally different classes of membrane-bound transport proteins: ion channels; transporters; aquaporins; and ATP-powered pumps. ATP-binding cassette (ABC) transporters are an example of ATP-dependent pumps. ABC transporters are ubiquitous membrane-bound proteins, present in all prokaryotes, as well as plants, fungi, yeast and animals. These pumps can move substrates in (influx) or out (efflux) of cells. In mammals, ABC transporters are expressed predominantly in the liver, intestine, blood-brain barrier, blood-testis barrier, placenta and kidney. ABC proteins transport a number of endogenous substrates, including inorganic anions, metal ions, peptides, amino acids, sugars and a large number of hydrophobic compounds and metabolites across the plasma membrane, and also across intracellular membranes. The human genome contains 49 ABC genes, arranged in eight subfamilies and named via divergent evolution. That ABC genes are important is underscored by the fact that mutations in at least I I of these genes are already known to cause severe inherited diseases (eg cystic fibrosis and X-linked adrenoleukodystrophy [X-ALD]). ABC transporters also participate in the movement of most drugs and their metabolites across cell surface and cellular organelle membranes; thus, defects in these genes can be important in terms of cancer therapy, pharmacokinetics and innumerable pharmacogenetic disorders.
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The Pfam Protein Families Database
Alex Bateman · Nucleic Acids Research · 2002 · 14.2K citations · Full text
A Map of Recent Positive Selection in the Human Genome
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Pfam: clans, web tools and services
ROBERT FINN · Nucleic Acids Research · 2005 · 2.3K citations · Full text
Genome-wide detection and characterization of positive selection in human populations
Pardis C. Sabeti, Patrick Varilly, Ben Fry et al. · Nature · 2007 · 2.3K citations · Full text
The Human ATP-Binding Cassette (ABC) Transporter Superfamily
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