Bioinformatics · 2010 · 746 citations · 6 references
ComputingBioinformaticsVisualizationGraph VisualizationNetwork BiologyNetwork VisualizationBiological NetworksMolecular Interaction NetworksMolecular VisualizationJavascriptWeb-based Graph VisualizationWeb-based Visualization
Abstract Summary: Cytoscape Web is a web-based network visualization tool–modeled after Cytoscape–which is open source, interactive, customizable and easily integrated into web sites. Multiple file exchange formats can be used to load data into Cytoscape Web, including GraphML, XGMML and SIF. Availability and Implementation: Cytoscape Web is implemented in Flex/ActionScript with a JavaScript API and is freely available at http://cytoscapeweb.cytoscape.org/ Contact: gary.bader@utoronto.ca Supplementary information: Supplementary data are available at Bioinformatics online.
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