Journal of Clinical Microbiology · 2000 · 102 citations · 37 references
Life SciencesGeneticsMolecular BiologyDiagnostic ParasitologyGenomicsMolecular DiagnosticsCestode BiologyCestode InfectionsMolecular Diagnosis Of ParasitesPolymerase Chain ReactionCestode DiagnosticsCestode Molecular BiologyGenomic Dna AnalysisGenomic Library ConstructionMolecular Detection Of ParasitesMolecular Diagnosis Of Parasitic InfectionsParasitic CestodesTaenia Solium Detection
We have designed species-specific oligonucleotides which permit the differential detection of two species of cestodes, Taenia saginata and Taenia solium. The oligonucleotides contain sequences established for two previously reported, noncoding DNA fragments cloned from a genomic library of T. saginata. The first, which is T. saginata specific (fragment HDP1), is a repetitive sequence with a 53-bp monomeric unit repeated 24 times in direct tandem along the 1, 272-bp fragment. From this sequence the two oligonucleotides that were selected (oligonucleotides PTs4F1 and PTs4R1) specifically amplified genomic DNA (gDNA) from T. saginata but not T. solium or other related cestodes and had a sensitivity down to 10 pg of T. saginata gDNA. The second DNA fragment (fragment HDP2; 3,954 bp) hybridized to both T. saginata and T. solium DNAs and was not a repetitive sequence. Three oligonucleotides (oligonucleotides PTs7S35F1, PTs7S35F2, and PTs7S35R1) designed from the sequence of HDP2 allowed the differential amplification of gDNAs from T. saginata, T. solium, and Echinococcus granulosus in a multiplex PCR, which exhibits a sensitivity of 10 pg.
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A comprehensive set of sequence analysis programs for the VAX
John Devereux, Paul Haeberli, Oliver Smithies · Nucleic Acids Research · 1984 · 14.4K citations · Full text
Cold Spring Harbor Laboratory; Cold Spring Harbor, NY
T. Cavalier-Smith · FEBS Letters · 1980 · 6.3K citations · Full text