INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · 2010 · 30 citations · 27 references
Life SciencesBiologyMicrobiologyBacteriologyMicrobial EcologyMicrobial Systematics16S Ribosomal Ribonucleic Acid AnalysisBacterial IdentificationBiochemical IdentificationMicrobial IdentificationPhylogenetic Sequence AnalysisProkaryotic ClassificationFatty AcidsGenomic Dna AnalysisGenus IdentificationMolecular Identification Of StrainsPhenotypic Bacterial IdentificationPhenotypic Characterization Of IsolatesReference Strain ComparisonsType Strain Characterization
A Gram-negative-staining, short-rod-shaped, floc-forming bacterium, designated strain RB3-7(T), was isolated from a laboratory-scale activated sludge system treating coke plant effluent. Comparative analysis of the 16S rRNA gene sequence demonstrated that the novel isolate was distantly related (≤ 95.8 % similarity) to Ottowia thiooxydans K11(T) within the family Comamonadaceae. Strain RB3-7(T) was catalase- and oxidase-positive and non-motile. The predominant fatty acids were C₁₆:₀, cyclo C₁₇:₀, C₁₈:₁ω7c and C₁₆:₁ω7c, and the major respiratory quinone was Q-8. The G+C content of the genomic DNA of strain RB3-7(T) was 68.5 mol%. On the basis of phenotypic, chemotaxonomic and molecular data, strain RB3-7(T) is considered to represent a novel species of the genus Ottowia, for which the name Ottowia pentelensis sp. nov. is proposed. The type strain is RB3-7(T) ( = DSM 21699(T) = NCAIM B 02336(T)).
27
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0
Koichiro Tamura, Joel T. Dudley, M Nei et al. · Molecular Biology and Evolution · 2007 · 28.8K citations · Full text
Distribution of Menaquinones in Actinomycetes and Corynebacteria
M.D. Collins, T. Pirouz, Michael Goodfellow et al. · Journal of General Microbiology · 1977 · 2.3K citations