Bioinformatics · 2003 · 26 citations · 5 references
Life SciencesBioinformaticsHigh-performance ComputingComputational BiologyGene Expression AnalysisGenomicsDifferential Expression AnalysisGene Expression ProfilingGenomic Data VisualizationClustering AlgorithmsGene ClusteringHierarchical ClusteringMicroarray Analysis
Abstract Summary: We have developed a platform independent, flexible and scalable Java environment for high-performance large-scale gene expression data analysis, which integrates various computational intensive hierarchical and non-hierarchical clustering algorithms. The environment includes a powerful client for data preparation and results visualization, an application server for computation and an additional administration tool. The package is available free of charge for academic and non-profit institutions. Availability: http://genome.tugraz.at/Software Contact: zlatko.trajanoski@tugraz.at * To whom correspondence should be addressed.
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Systematic determination of genetic network architecture
Saeed Tavazoie, Jason D. Hughes, Michael J. Campbell et al. · Nature Genetics · 1999 · 2.6K citations
Genesis: cluster analysis of microarray data
Alexander Sturn, John Quackenbush, Zlatko Trajanoski · Bioinformatics · 2002 · 1.8K citations · Full text