Journal of Bacteriology · 2014 · 23 citations · 31 references
Life SciencesBiologyMolecular BiologyMicrobial GeneticsProtein EngineeringStructural BiologyMembrane DomainsMembrane Protein TopologyMembrane ProteinsPhage GeneticsProtein StructureStructural DomainsC-terminal Domain StructureIntegral Membrane ProteinsPhage InfectionPhage Lytic CycleRandom MutagenesisRandom Mutagenesis Library ConstructionTransmembrane HelicesTransmembrane Protein Topology
t is the holin gene for coliphage T4, encoding a 218-amino-acid (aa) protein essential for the inner membrane hole formation that initiates lysis and terminates the phage infection cycle. T is predicted to be an integral membrane protein that adopts an N(in)-C(out) topology with a single transmembrane domain (TMD). This holin topology is different from those of the well-studied holins S105 (3 TMDs; N(out)-C(in)) of the coliphage lambda and S68 (2 TMDs; N(in)-C(in)) of the lambdoid phage 21. Here, we used random mutagenesis to construct a library of lysis-defective alleles of t to discern residues and domains important for holin function and for the inhibition of lysis by the T4 antiholin, RI. The results show that mutations in all 3 topological domains (N-terminal cytoplasmic, TMD, and C-terminal periplasmic) can abrogate holin function. Additionally, several lysis-defective alleles in the C-terminal domain are no longer competent in binding RI. Taken together, these results shed light on the roles of the previously uncharacterized N-terminal and C-terminal domains in lysis and its real-time regulation.
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Basic local alignment search tool
Stephen F. Altschul, Warren Gish, Webb Miller et al. · Journal of Molecular Biology · 1990 · 94.5K citations
Tmbase-A database of membrane spanning protein segments
Kay Hofmann, W Stoffel · Medical Entomology and Zoology · 1993 · 2.3K citations