Proceedings of the National Academy of Sciences · 2002 · 523 citations · 25 references
Life SciencesEvolutionary BiologyGeneticsPlant EvolutionPlant GeneticsPlant-microbe InteractionsFungal EvolutionFungal GeneticsMycotoxin-producing FungiMycotoxinsPlant-pathogen InteractionsPlant-pathogenic FungiAncestral PolymorphismChemotype DiversityEvolution Of MycotoxigenicityMycotoxin Gene ClustersMycotoxin-producing PathogensPlant Fungal DiseaseSingle-copy Gene PhylogeneticsToxin Genes
Filamentous fungi within the Fusarium graminearum species complex (Fg complex) are the primary etiological agents of Fusarium head blight (scab) of wheat and barley. Scab is an economically devastating plant disease that greatly limits grain yield and quality. In addition, scabby grain is often contaminated with trichothecene mycotoxins that act as virulence factors on some hosts, and pose a serious threat to animal health and food safety. Strain-specific differences in trichothecene metabolite profiles (chemotypes) are not well correlated with the Fg complex phylogeny based on genealogical concordance at six single-copy nuclear genes. To examine the basis for this discord between species and toxin evolution, a 19-kb region of the trichothecene gene cluster was sequenced in 39 strains chosen to represent the global genetic diversity of species in the Fg complex and four related species of Fusarium. Phylogenetic analyses demonstrated that polymorphism within these virulence-associated genes is transspecific and appears to have been maintained by balancing selection acting on chemotype differences that originated in the ancestor of this important group of plant pathogens. Chemotype-specific differences in selective constraint and evidence of adaptive evolution within trichothecene genes are also reported.
25
Codon-Substitution Models for Heterogeneous Selection Pressure at Amino Acid Sites
Ziheng Yang, Rasmus Nielsen, Nick Goldman et al. · Genetics · 2000 · 2.4K citations · Full text
RDP: detection of recombination amongst aligned sequences
Darren P. Martin, Edward P. Rybicki · Bioinformatics · 2000 · 1.5K citations
Kerry O’Donnell, Harold Kistler, Beth K. Tacke et al. · Proceedings of the National Academy of Sciences · 2000 · 851 citations · Full text