Journal of Biological Chemistry · 2001 · 83 citations · 42 references
Life SciencesBiochemistryChemistryBioisosterismChemical KineticsEnzymologyCatalytic MechanismsEnzyme KineticsKinetic Isotope EffectsDeuterium Isotope EffectEnzyme Kinetic Isotope EffectsIntrinsic Kinetic Isotope EffectKinetic Isotope Effect AnalysisKinetic Isotope Effect In Enzymatic CatalysisKinetic Isotope Effect In Organic ReactionsPh DependenceReaction Rate Isotope Dependence
His-172 and Tyr-169 are components of a triad in the active site of trimethylamine dehydrogenase (TMADH) comprising Asp-267, His-172, and Tyr-169. Stopped-flow kinetic studies with trimethylamine as substrate have indicated that mutation of His-172 to Gln reduces the limiting rate constant for flavin reduction approximately 10-fold (Basran, J., Sutcliffe, M. J., Hille, R., and Scrutton, N. S. (1999) Biochem. J. 341, 307-314). A kinetic isotope effect (KIE = k(H)/k(D)) accompanies flavin reduction by H172Q TMADH, the magnitude of which varies significantly with solution pH. With trimethylamine, flavin reduction by H172Q TMADH is controlled by a single macroscopic ionization (pK(a) = 6.8 +/- 0.1). This ionization is perturbed (pK(a) = 7.4 +/- 0.1) in reactions with perdeuterated trimethylamine and is responsible for the apparent variation in the KIE with solution pH. At pH 9.5, where the functional group controlling flavin reduction is fully ionized, the KIE is independent of temperature in the range 277-297 K, consistent with vibrationally assisted hydrogen tunneling during breakage of the substrate C-H bond. Y169F TMADH is approximately 4-fold more compromised than H172Q TMADH for hydrogen transfer, which occurs non-classically. Studies with Y169F TMADH suggest partial thermal excitation of substrate prior to hydrogen tunneling by a vibrationally assisted mechanism. Our studies illustrate the varied effects of compromising mutations on tunneling regimes in enzyme molecules.
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Enzyme dynamics and hydrogen tunnelling in a thermophilic alcohol dehydrogenase
Amnon Kohen, Raffaele Cannio, Simonetta Bartolucci et al. · Nature · 1999 · 580 citations
Hydrogen Tunneling in Enzyme Reactions
Yuan Cha, Christopher J L Murray, Judith P. Klinman · Science · 1989 · 480 citations
Sidney Strickland, Graham Palmer, Vincent Massey · Journal of Biological Chemistry · 1975 · 418 citations · Full text